Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 IGKV1-32-201ENST00000519290 311 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 OR6C73P-201ENST00000546432 358 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 GLYCAM1-201ENST00000546596 285 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 ANP32BP3-201ENST00000559213 706 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC091489.2-201ENST00000566263 604 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AL596327.1-201ENST00000603629 213 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC068831.8-201ENST00000620171 435 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 OR5BR1P-201ENST00000524992 1330 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CDR1-202ENST00000625883 1485 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 RNU5E-5P-201ENST00000365379 116 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 RNU6-723P-201ENST00000383973 107 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC109780.2-201ENST00000413467 845 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC012498.1-201ENST00000424037 437 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC009238.2-201ENST00000431026 355 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AL513175.1-201ENST00000431492 780 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 UBE2V1P5-201ENST00000440070 405 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AL033528.1-201ENST00000453780 140 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 HMGB1P4-201ENST00000455362 567 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 UBDP1-202ENST00000457888 382 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC006967.1-201ENST00000467608 589 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC007537.2-201ENST00000472093 511 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 SNORA20.3-201ENST00000516880 132 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 PAICSP4-201ENST00000517543 1253 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 RN7SL290P-201ENST00000578661 300 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC233280.2-201ENST00000603917 1070 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AC019193.2-201ENST00000610012 634 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 LRRC77P-213ENST00000637727 880 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 AL031985.3-201ENST00000565390 2449 ntBASIC5.72□□□□□ -1.49
PDLIM7Q9NR12 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM7Q9NR12 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM7Q9NR12 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM7Q9NR12 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM7Q9NR12 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM7Q9NR12 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RNU6-181P-201ENST00000363225 107 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RNA5SP113-201ENST00000410486 84 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RWDD4P2-201ENST00000426392 563 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 USP9YP8-201ENST00000441913 500 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms