Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 RNU2-28P-201ENST00000410457 189 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC002524.1-201ENST00000411687 547 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC073335.1-201ENST00000427776 363 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 KCTD10P1-201ENST00000434203 625 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RPS17P8-201ENST00000434525 335 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RN7SL558P-201ENST00000497468 299 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC006499.5-201ENST00000505037 514 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC091868.1-201ENST00000508746 304 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AP000873.5-201ENST00000533906 236 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC008507.1-201ENST00000587506 734 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC073544.2-201ENST00000601155 540 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AC106028.5-201ENST00000610332 395 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 MUC2-202ENST00000613187 4845 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 TLK1P1-201ENST00000456760 2440 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 CYP1D1P-201ENST00000416662 1433 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 RPL21P132-201ENST00000331267 462 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 VDAC2P1-201ENST00000399358 958 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 OR6C64P-201ENST00000419708 825 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL953862.1-201ENST00000423016 168 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 MTND1P34-201ENST00000438556 671 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 ARL2BPP10-201ENST00000446487 531 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC239809.1-201ENST00000450470 217 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC114981.1-201ENST00000503897 678 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 RPL12P22-201ENST00000519073 490 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 DEFB131D-201ENST00000526803 184 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC040958.1-201ENST00000561102 201 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC011260.1-201ENST00000578420 472 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AP005119.2-201ENST00000579735 1105 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AP001521.1-201ENST00000609150 300 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL122125.1-201ENST00000616999 600 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AC079228.1-201ENST00000624774 1049 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 THAP12P5-201ENST00000405864 2275 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTA1Q9NP79 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL450345.1-202ENST00000605741 3881 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 AL592148.3-201ENST00000608771 2646 ntBASIC5.41□□□□□ -1.54
VTA1Q9NP79 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.4□□□□□ -1.54
VTA1Q9NP79 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms