Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MIR7109-201ENST00000613748 65 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 RMST_10.1-201ENST00000616309 154 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 RBPJP2-201ENST00000618187 1444 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.778-201ENST00000620203 90 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AC009120.2-204ENST00000621548 2032 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR4272-201ENST00000635924 64 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AC068647.2-201ENST00000637380 353 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AC010325.3-201ENST00000641084 394 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AL596275.2-203ENST00000641951 371 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AC104447.1-201ENST00000624214 2124 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AL451142.2-201ENST00000429076 2090 ntBASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-3Q9BYR4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AC105749.1-201ENST00000631338 2008 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AC012213.2-201ENST00000562917 4597 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 MTHFD1P1-201ENST00000413059 2764 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 TMSB4XP2-201ENST00000335179 210 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 STAG3L4-201ENST00000352103 530 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU4-82P-201ENST00000362443 140 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 SNORD81.1-201ENST00000363064 77 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-1125P-201ENST00000363601 107 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-533P-201ENST00000384144 107 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR188-201ENST00000385034 86 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-279P-201ENST00000391297 101 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AC093719.1-202ENST00000392735 373 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AL591034.1-201ENST00000407447 340 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.608-201ENST00000410647 95 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms