Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AKAP17BP-201ENST00000431706 2719 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC127070.3-201ENST00000503695 3263 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RN7SKP115-201ENST00000363177 317 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 Y_RNA.151-201ENST00000363566 112 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPS4XP7-201ENST00000406274 780 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPSAP60-201ENST00000415403 880 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 BX276092.3-201ENST00000424182 230 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPL23AP31-201ENST00000456160 467 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 LINC01399-202ENST00000458450 244 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC087385.1-201ENST00000475062 312 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 MYL6P4-201ENST00000477911 453 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPL21P42-201ENST00000488408 464 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 RPL7L1P7-201ENST00000509986 724 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 HSD3BP3-201ENST00000514706 994 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 RNU7-4P-201ENST00000516961 62 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 IGKV1D-32-201ENST00000517449 318 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 IGLVI-42-201ENST00000522485 381 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AP005597.2-201ENST00000526238 341 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC138749.2-201ENST00000566048 167 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL158032.1-201ENST00000605401 106 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL159153.1-201ENST00000619688 317 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 AL121985.2-201ENST00000621192 555 ntBASIC6.4□□□□□ -1.38
USB1Q9BQ65 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
USB1Q9BQ65 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
USB1Q9BQ65 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.4□□□□□ -1.39
USB1Q9BQ65 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USB1Q9BQ65 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
USB1Q9BQ65 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.4□□□□□ -1.39
USB1Q9BQ65 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USB1Q9BQ65 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.39
USB1Q9BQ65 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USB1Q9BQ65 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.4□□□□□ -1.39
USB1Q9BQ65 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.4□□□□□ -1.39
USB1Q9BQ65 AC112243.1-201ENST00000623949 3851 ntBASIC6.4□□□□□ -1.39
USB1Q9BQ65 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USB1Q9BQ65 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.4□□□□□ -1.39
USB1Q9BQ65 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 AL049555.1-201ENST00000562834 1933 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
USB1Q9BQ65 RNU6-1159P-201ENST00000362933 107 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 RNA5SP514-201ENST00000363717 111 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 SMIM11P1-201ENST00000369586 178 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 FAUP2-201ENST00000394301 401 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC069213.2-201ENST00000420238 366 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 UBE2V1P4-201ENST00000425374 344 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 MYL8P-204ENST00000431574 518 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 HMGB3P24-201ENST00000433260 622 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AP000936.3-201ENST00000438127 255 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 PPIAP10-201ENST00000438675 458 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 SRP68P2-201ENST00000456184 254 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 RNU6-1218P-201ENST00000458990 108 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC096922.1-201ENST00000461635 651 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 RPS10P28-201ENST00000480396 498 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 RN7SL775P-201ENST00000498361 336 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC105384.2-201ENST00000508433 640 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 OR4H6P-201ENST00000563771 921 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.39□□□□□ -1.39
USB1Q9BQ65 VN1R91P-201ENST00000594377 169 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC006557.5-201ENST00000603126 811 ntBASIC6.39□□□□□ -1.39
USB1Q9BQ65 AC010900.2-201ENST00000604508 210 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms