Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AL139276.1-201ENST00000311910 1001 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.22-201ENST00000362492 102 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 RNU1-65P-201ENST00000363919 148 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 RNA5SP232-201ENST00000364144 119 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 SNORA75B-201ENST00000384053 137 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 UBE2V1P14-201ENST00000415815 558 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC093155.2-201ENST00000420734 937 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC012065.2-201ENST00000421295 375 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 RPS24P8-201ENST00000431490 402 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC010881.1-201ENST00000433830 235 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 RPL12P11-201ENST00000439970 501 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 RPL35AP28-201ENST00000459730 331 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AL049714.1-201ENST00000466686 347 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 PRMT5P1-201ENST00000514351 598 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 Y_RNA.721-201ENST00000517207 102 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 IGKV2-36-201ENST00000519999 223 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 TRIM51DP-201ENST00000529746 596 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 ATP1B3P1-201ENST00000605365 821 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 MIR6811-201ENST00000620409 58 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 SNX18P12-201ENST00000624821 759 ntBASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.34□□□□□ -1.39
LYSMD3Q7Z3D4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LYSMD3Q7Z3D4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LYSMD3Q7Z3D4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
LYSMD3Q7Z3D4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.34□□□□□ -1.4
LYSMD3Q7Z3D4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 GUCY1B2-204ENST00000531898 1979 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC096921.2-201ENST00000561507 1916 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 DOCK11P1-201ENST00000553480 5932 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 Y_RNA.396-201ENST00000383949 103 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-890P-201ENST00000384121 107 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 OR6C66P-201ENST00000414917 930 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RPL36AP36-201ENST00000418616 301 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC096632.1-201ENST00000427395 310 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL161722.2-201ENST00000434731 981 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL035551.1-201ENST00000446931 348 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 MTND1P17-201ENST00000448961 204 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC092324.1-201ENST00000468671 324 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC092451.1-201ENST00000480211 153 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RPL38P3-201ENST00000484463 213 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RPS4XP14-201ENST00000493072 781 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC113367.2-201ENST00000505749 160 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 HIGD1AP14-201ENST00000507617 282 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 HMGN1P9-201ENST00000515212 298 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-408P-201ENST00000515910 100 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RNU6-256P-201ENST00000516747 97 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RN7SKP99-201ENST00000517028 307 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AP005639.1-201ENST00000526939 192 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 OR8R1P-201ENST00000543943 764 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AC128657.1-201ENST00000549459 145 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 Z82243.1-201ENST00000609432 473 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 AL355810.1-201ENST00000614629 552 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 TCL6_3.1-201ENST00000619064 137 ntBASIC6.33□□□□□ -1.4
LYSMD3Q7Z3D4 MIR7159-201ENST00000620587 66 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms