Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN6P56747 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN6P56747 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN6P56747 AC068790.5-201ENST00000602741 355 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 AC083899.3-201ENST00000603413 594 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 AC010680.4-201ENST00000605334 543 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 AC244258.1-201ENST00000637553 1071 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN6P56747 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN6P56747 OR11H5P-202ENST00000641612 1325 ntBASIC3.61□□□□□ -1.83
CLDN6P56747 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN6P56747 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN6P56747 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN6P56747 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLDN6P56747 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN6P56747 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN6P56747 LINC02471-203ENST00000641941 4752 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN6P56747 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
CLDN6P56747 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 RNU1-87P-201ENST00000363727 170 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 RPL7P44-201ENST00000424827 742 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL031736.2-201ENST00000426573 787 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL160175.1-201ENST00000428124 247 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 VN1R25P-201ENST00000443385 738 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 VN1R40P-201ENST00000455196 941 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 RPL21P10-201ENST00000463521 490 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 AC107398.1-201ENST00000486904 505 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 RPL7P23-201ENST00000493874 747 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN6P56747 FTH1P24-201ENST00000503502 462 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 MTATP6P22-201ENST00000507369 598 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 OR5H4P-201ENST00000510851 923 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AC093770.1-201ENST00000511559 571 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN6P56747 TRAV11-201ENST00000539512 339 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN6P56747 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN6P56747 GTF2IP8-201ENST00000560687 584 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AP001180.3-201ENST00000582221 145 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AC010591.1-201ENST00000603941 649 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL139286.1-201ENST00000604465 483 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AP004607.9-201ENST00000618202 316 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 AL773545.4-201ENST00000637262 310 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 AL513478.4-201ENST00000641636 310 ntBASIC3.6□□□□□ -1.83
CLDN6P56747 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN6P56747 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN6P56747 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 AC012020.1-201ENST00000624541 1728 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CLDN6P56747 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 AC138393.1-206ENST00000540997 1886 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 ZNF603P-201ENST00000405613 487 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 DBIP2-201ENST00000419076 262 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN6P56747 MTND2P11-201ENST00000423638 648 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 AC017083.1-201ENST00000428093 483 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN6P56747 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 HMGB1P37-201ENST00000439613 609 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN6P56747 AL133477.1-201ENST00000457472 514 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN6P56747 AC025518.1-201ENST00000479856 347 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN6P56747 AP000563.1-201ENST00000490865 758 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN6P56747 HMGB1P3-201ENST00000502802 616 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CLDN6P56747 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN6P56747 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN6P56747 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN6P56747 AC104662.1-201ENST00000604448 511 ntBASIC3.59□□□□□ -1.83
CLDN6P56747 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN6P56747 AL356489.2-201ENST00000566968 3528 ntBASIC3.59□□□□□ -1.84
CLDN6P56747 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN6P56747 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN6P56747 AL133412.1-201ENST00000380194 2992 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms