Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.16□□□□□ -1.9
ATF1P18846 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ATF1P18846 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ATF1P18846 GABPAP-201ENST00000419271 1356 ntBASIC3.15□□□□□ -1.9
ATF1P18846 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
ATF1P18846 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATF1P18846 RNU4-23P-201ENST00000362839 140 ntBASIC3.15□□□□□ -1.91
ATF1P18846 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATF1P18846 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATF1P18846 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.15□□□□□ -1.91
ATF1P18846 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AL160175.1-201ENST00000428124 247 ntBASIC3.15□□□□□ -1.91
ATF1P18846 MRPS18BP2-201ENST00000434310 759 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.15□□□□□ -1.91
ATF1P18846 TPTE2P6-202ENST00000445572 1007 ntBASIC3.15□□□□□ -1.91
ATF1P18846 HSFY6P-201ENST00000445573 403 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.15□□□□□ -1.91
ATF1P18846 HMGB3P30-201ENST00000457863 606 ntBASIC3.15□□□□□ -1.91
ATF1P18846 UBDP1-202ENST00000457888 382 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC087312.1-201ENST00000471411 480 ntBASIC3.15□□□□□ -1.91
ATF1P18846 NDUFA5P9-201ENST00000472609 340 ntBASIC3.15□□□□□ -1.91
ATF1P18846 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC010460.1-201ENST00000507087 466 ntBASIC3.15□□□□□ -1.91
ATF1P18846 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.15□□□□□ -1.91
ATF1P18846 AC011492.1-201ENST00000600023 315 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC121761.2-201ENST00000617300 689 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
ATF1P18846 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.15□□□□□ -1.91
ATF1P18846 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ATF1P18846 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATF1P18846 SEPT7P7-201ENST00000420492 1301 ntBASIC3.15□□□□□ -1.91
ATF1P18846 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATF1P18846 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF1P18846 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF1P18846 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF1P18846 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 RNA5SP283-201ENST00000365604 119 ntBASIC3.14□□□□□ -1.91
ATF1P18846 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
ATF1P18846 MIR30B-201ENST00000384850 88 ntBASIC3.14□□□□□ -1.91
ATF1P18846 HMGB1P10-201ENST00000395823 563 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AL049693.1-201ENST00000402760 611 ntBASIC3.14□□□□□ -1.91
ATF1P18846 HMGB3P18-201ENST00000406327 590 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 AC010385.1-201ENST00000412374 256 ntBASIC3.14□□□□□ -1.91
ATF1P18846 MTND4P22-201ENST00000413116 1169 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AL591419.1-201ENST00000427423 339 ntBASIC3.14□□□□□ -1.91
ATF1P18846 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF1P18846 AC023347.2-201ENST00000433994 462 ntBASIC3.14□□□□□ -1.91
ATF1P18846 OR4C10P-201ENST00000434991 931 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 AC010655.1-201ENST00000449336 292 ntBASIC3.14□□□□□ -1.91
ATF1P18846 CEACAMP4-201ENST00000457676 421 ntBASIC3.14□□□□□ -1.91
ATF1P18846 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF1P18846 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AC092451.1-201ENST00000480211 153 ntBASIC3.14□□□□□ -1.91
ATF1P18846 RPL5P23-201ENST00000496040 868 ntBASIC3.14□□□□□ -1.91
ATF1P18846 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.14□□□□□ -1.91
ATF1P18846 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF1P18846 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.14□□□□□ -1.91
ATF1P18846 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.14□□□□□ -1.91
ATF1P18846 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.14□□□□□ -1.91
ATF1P18846 AC074029.2-201ENST00000551045 634 ntBASIC3.14□□□□□ -1.91
ATF1P18846 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF1P18846 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.14□□□□□ -1.91
ATF1P18846 AC008507.1-201ENST00000587506 734 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.14□□□□□ -1.91
ATF1P18846 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
ATF1P18846 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 AL354798.1-201ENST00000622505 329 ntBASIC3.14□□□□□ -1.91
ATF1P18846 AL732618.1-201ENST00000623251 301 ntBASIC3.14□□□□□ -1.91
ATF1P18846 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF1P18846 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF1P18846 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATF1P18846 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATF1P18846 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATF1P18846 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ATF1P18846 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
ATF1P18846 FAM91A3P-201ENST00000456826 2544 ntBASIC3.13□□□□□ -1.91
ATF1P18846 RNA5SP167-201ENST00000365461 116 ntBASIC3.13□□□□□ -1.91
ATF1P18846 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ATF1P18846 EI24P2-201ENST00000397776 1076 ntBASIC3.13□□□□□ -1.91
ATF1P18846 HNRNPDP2-201ENST00000406475 478 ntBASIC3.13□□□□□ -1.91
ATF1P18846 RNA5SP31-201ENST00000411144 127 ntBASIC3.13□□□□□ -1.91
ATF1P18846 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms