Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 NANOGP10-201ENST00000453325 895 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 MRPL35P4-201ENST00000453682 566 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC073522.1-201ENST00000483312 377 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.38□□□□□ -1.87
UBCP0CG48 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC016065.2-201ENST00000514530 444 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.38□□□□□ -1.87
UBCP0CG48 RNA5SP179-201ENST00000517284 121 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC009643.1-201ENST00000532030 391 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.38□□□□□ -1.87
UBCP0CG48 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AL137849.1-201ENST00000604767 169 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AC091167.4-201ENST00000605079 184 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 BRDTP1-201ENST00000605735 677 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 BX322635.1-201ENST00000605804 496 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 MIR6730-201ENST00000622213 67 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.37□□□□□ -1.87
UBCP0CG48 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 AC046144.1-201ENST00000478559 1853 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 SNORA7.2-201ENST00000364446 145 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 AC002075.2-201ENST00000425207 252 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 UBE2V1P1-201ENST00000430836 445 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 USP9YP31-201ENST00000431405 881 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 AC006994.1-201ENST00000438212 839 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 AC239367.2-201ENST00000447309 705 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 MTND5P8-201ENST00000449817 1083 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AL513343.1-201ENST00000451818 792 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AL136097.1-201ENST00000456945 913 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 CABYRP1-201ENST00000465493 1045 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AC084198.1-201ENST00000477747 402 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 GAPDHP36-201ENST00000480688 918 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 NCOR1P1-202ENST00000486162 291 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 TRBV12-2-201ENST00000489763 344 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 AC104115.2-201ENST00000523026 687 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 YPEL5P3-201ENST00000547227 352 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AL121576.1-201ENST00000556055 276 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.37□□□□□ -1.87
UBCP0CG48 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 YWHAQP7-201ENST00000603536 658 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 AC015802.5-201ENST00000607478 399 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 STMN1P1-201ENST00000617809 440 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBCP0CG48 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 AC104446.1-201ENST00000613728 1321 ntBASIC3.37□□□□□ -1.87
UBCP0CG48 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
UBCP0CG48 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBCP0CG48 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UBCP0CG48 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 RNU6-252P-201ENST00000363232 107 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 RNA5SP97-201ENST00000365006 84 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 SNORA51.12-201ENST00000384448 134 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBCP0CG48 OR6C69P-201ENST00000394268 893 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC007390.1-201ENST00000415722 356 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 MTND2P16-201ENST00000419987 799 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms