Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC026523.2-201ENST00000625039 7739 ntBASIC1.46□□□□□ -2.18
USH2AO75445 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.46□□□□□ -2.18
USH2AO75445 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC1.46□□□□□ -2.18
USH2AO75445 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
USH2AO75445 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 Y_RNA.295-201ENST00000364918 102 ntBASIC1.46□□□□□ -2.18
USH2AO75445 SETP9-201ENST00000423837 832 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AL513328.1-201ENST00000446460 224 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.46□□□□□ -2.18
USH2AO75445 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.46□□□□□ -2.18
USH2AO75445 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.46□□□□□ -2.18
USH2AO75445 AC109458.1-201ENST00000508858 316 ntBASIC1.46□□□□□ -2.18
USH2AO75445 IGKV2-36-201ENST00000519999 223 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AC127024.5-201ENST00000580085 462 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AC026790.2-201ENST00000606282 430 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AC006946.3-201ENST00000609791 756 ntBASIC1.46□□□□□ -2.18
USH2AO75445 AL590808.1-201ENST00000618696 141 ntBASIC1.46□□□□□ -2.18
USH2AO75445 OR5AC4P-202ENST00000642086 985 ntBASIC1.46□□□□□ -2.18
USH2AO75445 ELF2P3-201ENST00000445099 1506 ntBASIC1.46□□□□□ -2.18
USH2AO75445 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC1.46□□□□□ -2.18
USH2AO75445 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC1.46□□□□□ -2.18
USH2AO75445 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USH2AO75445 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.46□□□□□ -2.18
USH2AO75445 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.46□□□□□ -2.18
USH2AO75445 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 RPL21P132-201ENST00000331267 462 ntBASIC1.45□□□□□ -2.18
USH2AO75445 MTND4P22-201ENST00000413116 1169 ntBASIC1.45□□□□□ -2.18
USH2AO75445 SKP1P3-201ENST00000429280 487 ntBASIC1.45□□□□□ -2.18
USH2AO75445 NPM1P48-201ENST00000436002 853 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AL662791.1-201ENST00000441992 928 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 TPT1P1-201ENST00000458495 518 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC023598.1-201ENST00000472521 361 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 AP006245.1-201ENST00000522549 120 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
USH2AO75445 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
USH2AO75445 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC1.45□□□□□ -2.18
USH2AO75445 MIR22-201ENST00000362190 85 ntBASIC1.45□□□□□ -2.18
USH2AO75445 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC1.45□□□□□ -2.18
USH2AO75445 OR5AW1P-201ENST00000426334 1006 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.45□□□□□ -2.18
USH2AO75445 HMGB3P13-201ENST00000511263 607 ntBASIC1.45□□□□□ -2.18
USH2AO75445 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 MIR6779-201ENST00000617283 64 ntBASIC1.45□□□□□ -2.18
USH2AO75445 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 AL138820.1-201ENST00000617901 5305 ntBASIC1.45□□□□□ -2.18
USH2AO75445 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC1.45□□□□□ -2.18
USH2AO75445 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 U8.2-201ENST00000363156 134 ntBASIC1.45□□□□□ -2.18
USH2AO75445 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC1.45□□□□□ -2.18
USH2AO75445 RPL9P32-201ENST00000464118 620 ntBASIC1.45□□□□□ -2.18
USH2AO75445 OR4R3P-201ENST00000525084 838 ntBASIC1.45□□□□□ -2.18
USH2AO75445 OR4A12P-201ENST00000530847 918 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AL035413.2-201ENST00000604801 525 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC104623.2-202ENST00000623477 4002 ntBASIC1.45□□□□□ -2.18
USH2AO75445 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC1.45□□□□□ -2.18
USH2AO75445 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
USH2AO75445 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
USH2AO75445 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
USH2AO75445 RSL24D1P1-201ENST00000404972 493 ntBASIC1.45□□□□□ -2.18
USH2AO75445 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USH2AO75445 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC1.45□□□□□ -2.18
USH2AO75445 AC004448.2-201ENST00000422360 586 ntBASIC1.45□□□□□ -2.18
USH2AO75445 AC022018.1-201ENST00000430685 241 ntBASIC1.45□□□□□ -2.18
USH2AO75445 RPL23AP73-201ENST00000492507 471 ntBASIC1.45□□□□□ -2.18
USH2AO75445 MTND4P2-201ENST00000507767 1203 ntBASIC1.45□□□□□ -2.18
USH2AO75445 KCTD9P6-201ENST00000522306 950 ntBASIC1.45□□□□□ -2.18
USH2AO75445 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms