Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 DHX9P1-201ENST00000436565 3076 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
VPS4BO75351 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS4BO75351 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS4BO75351 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 MTCO3P31-201ENST00000405526 789 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC004022.2-201ENST00000413824 193 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 CDK8P2-201ENST00000415020 547 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 MTCO1P21-201ENST00000416634 589 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 MTCO3P1-205ENST00000422088 832 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS4BO75351 PRELID3BP10-201ENST00000431957 584 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 UBE2FP3-201ENST00000436366 524 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 RPL26P28-201ENST00000451325 435 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 RPS15AP1-201ENST00000457423 391 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 KRT19P6-201ENST00000510983 209 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 RNU6-488P-201ENST00000515918 99 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 ARL2BPP5-201ENST00000523141 481 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC136618.2-201ENST00000575091 400 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC008687.2-201ENST00000597865 520 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AL596327.1-201ENST00000603629 213 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC010200.2-201ENST00000605098 235 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC023813.4-201ENST00000607580 580 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AL355816.1-201ENST00000607951 118 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AP005432.2-201ENST00000608162 586 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC012360.2-201ENST00000609349 391 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 AC022106.2-201ENST00000620114 757 ntBASIC4.89□□□□□ -1.63
VPS4BO75351 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS4BO75351 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS4BO75351 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS4BO75351 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS4BO75351 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS4BO75351 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS4BO75351 AC090017.1-201ENST00000548612 1779 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 AC005332.5-201ENST00000591222 2919 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 RPL21P132-201ENST00000331267 462 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 SNORA73.1-201ENST00000363107 205 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 RNU6-1119P-201ENST00000384349 108 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 DEFB108C-201ENST00000400154 252 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AL512430.2-201ENST00000406786 339 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 PGBD4P8-201ENST00000412993 562 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS4BO75351 COX6B1P1-201ENST00000415962 213 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS4BO75351 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS4BO75351 EI24P4-201ENST00000423683 1078 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS4BO75351 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 LARP1BP3-201ENST00000437229 869 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 AL592447.1-201ENST00000447592 540 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 ST13P20-201ENST00000447996 1065 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 RPL7L1P1-201ENST00000448259 785 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS4BO75351 MTCYBP1-201ENST00000454315 1119 ntBASIC4.88□□□□□ -1.63
VPS4BO75351 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms