Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SAGE2P-201ENST00000420011 2126 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC008758.3-201ENST00000507003 1829 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHGDHO43175 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.84□□□□□ -1.63
PHGDHO43175 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PHGDHO43175 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 OR10J6P-201ENST00000289731 930 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 HMGB1P17-201ENST00000403495 628 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL592291.1-201ENST00000403830 352 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL024474.1-201ENST00000404655 591 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 BTBD10P2-201ENST00000404779 676 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 AL139128.1-201ENST00000413921 941 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 E2F6P2-201ENST00000420708 748 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 RPL7P30-201ENST00000420888 709 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 NPM1P34-201ENST00000428821 893 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL831737.1-201ENST00000441288 271 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 BX284632.1-201ENST00000478218 541 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 FAM172BP-201ENST00000487497 1089 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 SNRPCP2-201ENST00000504370 475 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 HIGD1AP14-201ENST00000507617 282 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC016065.2-201ENST00000514530 444 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 SNORD116-26-201ENST00000516006 96 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC104986.1-201ENST00000517978 436 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.84□□□□□ -1.63
PHGDHO43175 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 HSPE1P3-201ENST00000559254 309 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.84□□□□□ -1.63
PHGDHO43175 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC136618.2-201ENST00000575091 400 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC005951.1-201ENST00000576706 485 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 MIR5186-201ENST00000577504 120 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 MIR3176-201ENST00000582210 90 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC064872.1-201ENST00000604823 1072 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC087783.2-201ENST00000605070 562 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC107214.2-201ENST00000608204 634 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 HULC.1-201ENST00000612720 240 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AC022467.1-201ENST00000614738 749 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 MIR6826-201ENST00000617808 98 ntBASIC4.84□□□□□ -1.63
PHGDHO43175 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.84□□□□□ -1.63
PHGDHO43175 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHGDHO43175 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHGDHO43175 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PHGDHO43175 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PHGDHO43175 AC130650.2-201ENST00000618736 2403 ntBASIC4.84□□□□□ -1.64
PHGDHO43175 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.84□□□□□ -1.64
PHGDHO43175 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 MAPK10-320ENST00000641462 6696 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PHGDHO43175 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 RPL23P2-201ENST00000320371 421 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 U3.4-201ENST00000363352 213 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 RNA5SP428-201ENST00000365129 132 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 VN1R8P-201ENST00000407739 893 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC004987.3-201ENST00000413879 771 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AL049610.1-201ENST00000423374 372 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 KCTD10P1-201ENST00000434203 625 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 LARP1BP3-201ENST00000437229 869 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 AP000936.2-201ENST00000447151 681 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 MTCO2P18-201ENST00000457151 658 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL136126.1-201ENST00000473603 402 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 RNF138P1-201ENST00000502765 546 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms