Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 THAP12P4-201ENST00000528321 2266 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL138713.1-201ENST00000624026 2130 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 HSPD1P8-201ENST00000400121 1658 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CASC19-228ENST00000641414 1684 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RN7SKP15-201ENST00000364742 309 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RNA5SP279-201ENST00000365513 117 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 SNORA63.7-201ENST00000365579 123 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RNU1-46P-201ENST00000384425 164 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 Y_RNA.527-201ENST00000384573 102 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL359643.1-201ENST00000404109 423 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC099782.1-201ENST00000425889 474 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 PSMA6P3-201ENST00000428242 164 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL451136.1-201ENST00000435399 325 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RPL21P133-201ENST00000443666 476 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC079804.1-201ENST00000461922 436 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC004801.2-202ENST00000463559 283 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 H3F3AP3-201ENST00000497682 407 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC093767.1-201ENST00000504523 156 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 SNX18P24-201ENST00000505249 671 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CYCSP22-201ENST00000517555 339 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL137161.1-201ENST00000532231 390 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC006512.2-201ENST00000543250 486 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 MTCO3P23-201ENST00000561363 289 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 TVP23CP2-201ENST00000571473 623 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 COX6CP3-201ENST00000580869 223 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AC023043.2-201ENST00000589678 1026 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 SNORD96A-201ENST00000606577 79 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 uc_338.31-201ENST00000615595 186 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL049794.2-201ENST00000616301 365 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 AL162373.1-201ENST00000620433 407 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 U6.114-201ENST00000636407 96 ntBASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHB11Q9Y5F2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 AL592148.3-201ENST00000608771 2646 ntBASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 RBPJP2-201ENST00000618187 1444 ntBASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 Y_RNA.364-201ENST00000365532 101 ntBASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 MRPS6P2-201ENST00000381143 370 ntBASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 U3.52-201ENST00000384034 216 ntBASIC6.36□□□□□ -1.39
PCDHB11Q9Y5F2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms