Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC024587.1-201ENST00000505925 2157 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 AC007159.1-201ENST00000566529 4706 ntBASIC5.8□□□□□ -1.48
BHLHE41Q9C0J9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.234-201ENST00000364409 97 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 RNU4-20P-201ENST00000365601 151 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 MIR514A2-201ENST00000385131 88 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 MIR514A3-201ENST00000385132 88 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC018630.2-202ENST00000422992 927 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 Z82205.1-201ENST00000428456 297 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 OR3D1P-201ENST00000438288 955 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC108734.1-201ENST00000439549 399 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC099670.1-201ENST00000455141 783 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 PLGLA-201ENST00000465668 449 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC087879.1-201ENST00000474343 374 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC068587.1-201ENST00000483613 781 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC004062.1-201ENST00000509926 645 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC090958.1-201ENST00000511122 351 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 Y_RNA.665-201ENST00000516177 98 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 SNORD27.1-201ENST00000516319 72 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 SNORA74.1-201ENST00000516320 180 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 RN7SKP70-201ENST00000516655 271 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 RPL7P20-201ENST00000520308 745 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 SUMO2P20-201ENST00000520803 283 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC024224.1-201ENST00000538284 609 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 DPPA3P3-201ENST00000603842 430 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 MIR7109-201ENST00000613748 65 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 uc_338.15-201ENST00000615470 191 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BHLHE41Q9C0J9 AC011460.1-201ENST00000636268 1834 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AC012618.3-205ENST00000637896 1496 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AC011493.1-201ENST00000596753 1632 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 OR5P1P-201ENST00000299512 925 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 OR1S2-201ENST00000302592 978 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 RNU6-639P-201ENST00000384074 107 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 MIR92A2-201ENST00000385299 75 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 PRELID1P1-201ENST00000403549 660 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 SNORA77.2-201ENST00000408571 112 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 RN7SKP144-201ENST00000411108 279 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 OR1AA1P-201ENST00000419597 916 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 NMD3P2-201ENST00000421815 761 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 COX6CP15-201ENST00000426313 211 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AC079807.1-201ENST00000429993 481 ntBASIC5.78□□□□□ -1.48
BHLHE41Q9C0J9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms