Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DDX11Q96FC9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DDX11Q96FC9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 RNU6-761P-201ENST00000384148 107 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 RNY3P10-201ENST00000384764 102 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 RNA5SP498-201ENST00000411342 120 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 RPS15AP38-201ENST00000413110 372 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC098614.3-201ENST00000438957 440 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 EEF1E1P1-201ENST00000446998 430 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 BTF3P6-201ENST00000448054 499 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 MTND2P24-201ENST00000453434 806 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 RFC5P1-201ENST00000454419 874 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 RPL31P58-201ENST00000469001 379 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 RN7SKP244-201ENST00000516513 307 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 NPM1P6-201ENST00000521088 871 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC005868.1-201ENST00000536421 331 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC063949.1-201ENST00000552900 865 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DDX11Q96FC9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC079075.1-201ENST00000559543 878 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 BGLT3-201ENST00000564523 994 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC233702.9-201ENST00000581528 203 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 TUG1_1.1-201ENST00000610654 145 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC090517.2-201ENST00000614966 680 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC092794.2-201ENST00000620933 563 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AL356321.1-201ENST00000621360 228 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC007342.8-201ENST00000623278 678 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 AL356596.1-201ENST00000624230 379 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 AC099063.3-201ENST00000642066 185 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 MAPK10-263ENST00000641052 4307 ntBASIC5.84□□□□□ -1.47
DDX11Q96FC9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DDX11Q96FC9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
DDX11Q96FC9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DDX11Q96FC9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
DDX11Q96FC9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
DDX11Q96FC9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
DDX11Q96FC9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
DDX11Q96FC9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.84□□□□□ -1.48
DDX11Q96FC9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 RNU6-1042P-201ENST00000384204 107 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 BTF3P7-201ENST00000407097 488 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 ATG4AP1-201ENST00000416893 538 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 CCDC58P2-201ENST00000417131 366 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 COX6CP18-201ENST00000448769 222 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 RPS29P33-201ENST00000456717 146 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 RPL5P24-201ENST00000463742 885 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 AC072039.1-201ENST00000477611 581 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 RN7SL346P-201ENST00000491561 294 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 OR4G11P-201ENST00000492842 939 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
DDX11Q96FC9 AC006499.5-201ENST00000505037 514 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 KRT19P6-201ENST00000510983 209 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 RNA5SP43-201ENST00000516559 110 ntBASIC5.83□□□□□ -1.48
DDX11Q96FC9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.83□□□□□ -1.48
DDX11Q96FC9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms