Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD3Q7Z407 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 NPM1P11-201ENST00000417106 855 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC096638.2-201ENST00000434965 711 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 snoU13.26-201ENST00000459452 105 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 RPL5P30-201ENST00000465511 891 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 SCARNA20.6-201ENST00000517251 106 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC011270.1-201ENST00000558606 583 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL035413.2-201ENST00000604801 525 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL590808.1-201ENST00000618696 141 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 NPM1P38-201ENST00000403835 865 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ELOCP8-201ENST00000439309 332 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ELOCP15-201ENST00000442090 332 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL357552.1-201ENST00000445254 415 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC126389.1-201ENST00000477436 290 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 BRDTP1-201ENST00000605735 677 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AP004607.9-201ENST00000618202 316 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 NMD3P1-201ENST00000439704 1488 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 VN1R90P-201ENST00000595717 726 ntBASIC2.26□□□□□ -2.05
CSMD3Q7Z407 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD3Q7Z407 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC021678.1-201ENST00000505195 936 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC109329.2-201ENST00000519658 482 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 UBTFL9-201ENST00000534504 1148 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC025754.2-201ENST00000606491 432 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 MTCO1P8-201ENST00000416914 1523 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 DDX18P4-201ENST00000511690 1966 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 RNA5SP52-201ENST00000362448 134 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 HMGB3P20-201ENST00000417997 600 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 RPL35AP12-201ENST00000425362 338 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 TOMM20P4-201ENST00000427861 435 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 YWHAQP9-201ENST00000445891 512 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC008413.1-201ENST00000511864 177 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC004024.1-201ENST00000549244 247 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC234778.2-201ENST00000566241 354 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AL592295.2-201ENST00000612578 206 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 BX276092.3-201ENST00000424182 230 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 ATP5F1P5-201ENST00000526403 760 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC019227.1-201ENST00000526902 510 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC015849.2-201ENST00000605738 409 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms