Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC092184.1-201ENST00000625042 715 ntBASIC4.5□□□□□ -1.69
RAE1P78406 AL392088.2-201ENST00000637607 285 ntBASIC4.5□□□□□ -1.69
RAE1P78406 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 AC107027.3-201ENST00000565095 3473 ntBASIC4.5□□□□□ -1.69
RAE1P78406 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RAE1P78406 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RAE1P78406 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AL031119.1-201ENST00000404707 1879 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AL442639.1-201ENST00000625030 1899 ntBASIC4.49□□□□□ -1.69
RAE1P78406 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 PHKBP1-201ENST00000450951 1951 ntBASIC4.49□□□□□ -1.69
RAE1P78406 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 ZFRP1-201ENST00000457579 2970 ntBASIC4.49□□□□□ -1.69
RAE1P78406 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 AL121657.1-201ENST00000327215 531 ntBASIC4.49□□□□□ -1.69
RAE1P78406 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RAE1P78406 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 RNU6-657P-201ENST00000383904 107 ntBASIC4.49□□□□□ -1.69
RAE1P78406 SNORA51.8-201ENST00000384234 132 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AL109941.1-201ENST00000401925 229 ntBASIC4.49□□□□□ -1.69
RAE1P78406 SPTLC1P2-201ENST00000407089 121 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC073264.1-201ENST00000411508 416 ntBASIC4.49□□□□□ -1.69
RAE1P78406 RSU1P3-201ENST00000412878 835 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC009302.1-201ENST00000417147 390 ntBASIC4.49□□□□□ -1.69
RAE1P78406 GNG5P5-201ENST00000420444 220 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 USP9YP28-201ENST00000435142 589 ntBASIC4.49□□□□□ -1.69
RAE1P78406 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 MTCO1P19-201ENST00000443487 500 ntBASIC4.49□□□□□ -1.69
RAE1P78406 CEACAMP7-201ENST00000444105 496 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.49□□□□□ -1.69
RAE1P78406 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.49□□□□□ -1.69
RAE1P78406 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 ARPC3P2-201ENST00000457786 533 ntBASIC4.49□□□□□ -1.69
RAE1P78406 RNU6-956P-201ENST00000458868 103 ntBASIC4.49□□□□□ -1.69
RAE1P78406 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 RN7SL214P-201ENST00000487317 265 ntBASIC4.49□□□□□ -1.69
RAE1P78406 OR4G11P-201ENST00000492842 939 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 MTCYBP43-201ENST00000513621 740 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC022447.1-201ENST00000515358 464 ntBASIC4.49□□□□□ -1.69
RAE1P78406 RNU1-6P-201ENST00000516290 144 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 AC090502.2-201ENST00000549267 280 ntBASIC4.49□□□□□ -1.69
RAE1P78406 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.49□□□□□ -1.69
RAE1P78406 AC105129.1-201ENST00000560250 297 ntBASIC4.49□□□□□ -1.69
RAE1P78406 KPNA2P3-201ENST00000584190 848 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC107982.3-201ENST00000584957 985 ntBASIC4.49□□□□□ -1.69
RAE1P78406 NF1P5-201ENST00000588287 448 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC011487.3-201ENST00000593607 453 ntBASIC4.49□□□□□ -1.69
RAE1P78406 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 AC004987.4-201ENST00000603383 338 ntBASIC4.49□□□□□ -1.69
RAE1P78406 COX6CP4-201ENST00000605798 228 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC025594.3-201ENST00000613068 790 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC026585.1-201ENST00000619582 524 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AC018445.2-201ENST00000622987 260 ntBASIC4.49□□□□□ -1.69
RAE1P78406 AL356266.1-201ENST00000623311 483 ntBASIC4.49□□□□□ -1.69
RAE1P78406 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 AL079343.1-201ENST00000572358 1771 ntBASIC4.49□□□□□ -1.69
RAE1P78406 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.49□□□□□ -1.69
RAE1P78406 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RAE1P78406 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RAE1P78406 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RAE1P78406 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RAE1P78406 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
RAE1P78406 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.48□□□□□ -1.69
RAE1P78406 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RAE1P78406 RNU4-75P-201ENST00000364621 146 ntBASIC4.48□□□□□ -1.69
RAE1P78406 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RAE1P78406 SNORD96B-201ENST00000386148 79 ntBASIC4.48□□□□□ -1.69
RAE1P78406 DSTNP4-201ENST00000399472 474 ntBASIC4.48□□□□□ -1.69
RAE1P78406 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RAE1P78406 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms