Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H3AP68431 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H3AP68431 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H3AP68431 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H3AP68431 AC058791.1-201ENST00000608412 3198 ntBASIC3.15□□□□□ -1.9
HIST1H3AP68431 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H3AP68431 MFSD8-233ENST00000641482 4860 ntBASIC3.15□□□□□ -1.9
HIST1H3AP68431 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 MIR184-201ENST00000384962 84 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 HMGB1P10-201ENST00000395823 563 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 MTND4P11-201ENST00000417020 1058 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AL157884.3-201ENST00000448273 1184 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 HMGB3P8-201ENST00000449709 577 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 RPL5P13-201ENST00000462840 709 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC084357.1-201ENST00000473404 255 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC078817.1-201ENST00000492623 435 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 PRELID3BP5-201ENST00000508612 460 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC093331.1-201ENST00000521474 169 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC011492.1-201ENST00000600023 315 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 MIR4278-201ENST00000636094 69 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 AC006042.3-201ENST00000454684 1469 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H3AP68431 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
HIST1H3AP68431 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HIST1H3AP68431 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC007656.2-201ENST00000624902 4547 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 RNA5SP51-201ENST00000364750 119 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 MIR153-1-201ENST00000384914 90 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 CCNB2P1-201ENST00000399411 1150 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AIMP1P1-201ENST00000418670 937 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC007064.3-201ENST00000422608 359 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 MRPS18BP2-201ENST00000434310 759 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC007967.1-201ENST00000455422 1159 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 ACTG1P13-201ENST00000486987 1043 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 RPL30P11-201ENST00000495304 339 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 CDH12P2-201ENST00000504393 298 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC026784.1-201ENST00000507986 352 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 RN7SKP82-201ENST00000516786 223 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 MTCO2P22-201ENST00000603246 681 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC024941.1-201ENST00000612250 334 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC121761.2-201ENST00000617300 689 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC006065.5-201ENST00000623427 349 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
HIST1H3AP68431 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H3AP68431 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H3AP68431 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H3AP68431 RNU6-666P-201ENST00000363499 107 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 SNORA57.1-201ENST00000391227 145 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 AL590704.1-201ENST00000402856 794 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 ATP5A1P2-201ENST00000412323 255 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 RPS15AP6-201ENST00000420703 385 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 RPL7P2-201ENST00000427639 268 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 USP9YP31-201ENST00000431405 881 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H3AP68431 MTCYBP21-201ENST00000443300 1113 ntBASIC3.13□□□□□ -1.91
HIST1H3AP68431 NOTCH2P1-201ENST00000443481 624 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms