Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR30E-201ENST00000362104 92 ntBASIC3.2□□□□□ -1.9
SRP9P49458 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP9P49458 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP9P49458 RN7SKP202-201ENST00000410439 330 ntBASIC3.2□□□□□ -1.9
SRP9P49458 RN7SKP159-201ENST00000410657 292 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC093084.1-201ENST00000424233 687 ntBASIC3.2□□□□□ -1.9
SRP9P49458 CACYBPP1-201ENST00000438592 684 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC074367.1-201ENST00000438685 1125 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 HMGN2P21-201ENST00000447764 270 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
SRP9P49458 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SRP9P49458 HMGN1P11-201ENST00000508668 303 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC023141.12-201ENST00000512399 199 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP9P49458 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.2□□□□□ -1.9
SRP9P49458 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
SRP9P49458 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC006960.3-201ENST00000561845 705 ntBASIC3.2□□□□□ -1.9
SRP9P49458 AC106785.1-201ENST00000565935 262 ntBASIC3.2□□□□□ -1.9
SRP9P49458 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 AC087499.8-201ENST00000578406 226 ntBASIC3.2□□□□□ -1.9
SRP9P49458 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.2□□□□□ -1.9
SRP9P49458 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP9P49458 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP9P49458 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRP9P49458 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.2□□□□□ -1.9
SRP9P49458 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 RNU6ATAC-201ENST00000408749 126 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SRP9P49458 RPL31P45-201ENST00000419532 356 ntBASIC3.19□□□□□ -1.9
SRP9P49458 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 TCEA1P2-201ENST00000420496 906 ntBASIC3.19□□□□□ -1.9
SRP9P49458 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SRP9P49458 AC006989.1-201ENST00000427212 131 ntBASIC3.19□□□□□ -1.9
SRP9P49458 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
SRP9P49458 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.19□□□□□ -1.9
SRP9P49458 AC069277.2-201ENST00000454211 432 ntBASIC3.19□□□□□ -1.9
SRP9P49458 PTGES3P5-201ENST00000455109 434 ntBASIC3.19□□□□□ -1.9
SRP9P49458 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP9P49458 RPL6P9-201ENST00000466502 859 ntBASIC3.19□□□□□ -1.9
SRP9P49458 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 RPS4XP22-201ENST00000480755 780 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP9P49458 AC010265.1-201ENST00000513509 211 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AC093853.1-201ENST00000515689 483 ntBASIC3.19□□□□□ -1.9
SRP9P49458 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.19□□□□□ -1.9
SRP9P49458 RNU6-352P-201ENST00000516908 107 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.19□□□□□ -1.9
SRP9P49458 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.19□□□□□ -1.9
SRP9P49458 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.19□□□□□ -1.9
SRP9P49458 MIR5187-201ENST00000583479 76 ntBASIC3.19□□□□□ -1.9
SRP9P49458 SNORA62.6-201ENST00000606322 83 ntBASIC3.19□□□□□ -1.9
SRP9P49458 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 AL391497.1-201ENST00000608671 547 ntBASIC3.19□□□□□ -1.9
SRP9P49458 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SRP9P49458 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 AL513302.2-201ENST00000562313 1842 ntBASIC3.19□□□□□ -1.9
SRP9P49458 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.19□□□□□ -1.9
SRP9P49458 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SRP9P49458 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 MIR554-201ENST00000384874 96 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AP000567.1-201ENST00000406413 156 ntBASIC3.18□□□□□ -1.9
SRP9P49458 RNU6-55P-201ENST00000411092 107 ntBASIC3.18□□□□□ -1.9
SRP9P49458 RNU6-954P-201ENST00000411355 107 ntBASIC3.18□□□□□ -1.9
SRP9P49458 XKRYP4-201ENST00000414395 483 ntBASIC3.18□□□□□ -1.9
SRP9P49458 HMGB3P20-201ENST00000417997 600 ntBASIC3.18□□□□□ -1.9
SRP9P49458 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms