Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 XKRYP5-201ENST00000449659 483 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 AC104629.1-201ENST00000494226 508 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 AC104619.4-201ENST00000510773 249 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 OSBPL9P3-201ENST00000534523 595 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 CCNG2P1-201ENST00000549521 1000 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 MIR5187-201ENST00000583479 76 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCC3P46736 CCDC58P3-201ENST00000590792 430 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCC3P46736 AC006249.1-201ENST00000621223 471 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 AC004777.1-201ENST00000624317 287 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 AC009093.8-201ENST00000641769 292 ntBASIC4.05□□□□□ -1.76
BRCC3P46736 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BRCC3P46736 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRCC3P46736 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCC3P46736 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
BRCC3P46736 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 RNA5SP51-201ENST00000364750 119 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 RNU6-796P-201ENST00000391086 107 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 LINC01347-201ENST00000417964 355 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 TCEA1P2-201ENST00000420496 906 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC013410.2-201ENST00000422627 201 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 SEC63P1-201ENST00000425785 1258 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 NPM1P24-201ENST00000428039 894 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 PTP4A1P3-201ENST00000433661 420 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 RPL12P46-201ENST00000436610 195 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 SDR42E1P3-201ENST00000438345 502 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 CBX1P4-201ENST00000439415 457 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 RPL7P15-201ENST00000461190 712 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 HMGN1P11-201ENST00000508668 303 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC026726.1-201ENST00000512859 601 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 MTND5P21-201ENST00000531961 522 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.04□□□□□ -1.76
BRCC3P46736 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 BNIP3P22-201ENST00000593399 556 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 VN1R84P-201ENST00000593697 235 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.04□□□□□ -1.76
BRCC3P46736 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 AC008739.3-201ENST00000603262 127 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC090525.3-201ENST00000605601 189 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 SNORA62.6-201ENST00000606322 83 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 RNU1-30P-201ENST00000606575 163 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCC3P46736 AC017076.1-201ENST00000607613 578 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AL354760.1-201ENST00000608357 643 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC244100.1-202ENST00000621554 382 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 MIR6715B-201ENST00000637172 77 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 AC119674.1-207ENST00000641355 633 ntBASIC4.04□□□□□ -1.76
BRCC3P46736 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCC3P46736 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCC3P46736 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCC3P46736 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCC3P46736 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCC3P46736 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
BRCC3P46736 SNORA63.3-201ENST00000362682 132 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCC3P46736 RNU6-317P-201ENST00000384031 107 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 RNU6-146P-201ENST00000384602 108 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCC3P46736 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCC3P46736 AL158825.1-201ENST00000414735 521 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AL158050.1-201ENST00000416077 457 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 RAC1P3-201ENST00000416129 580 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.03□□□□□ -1.76
BRCC3P46736 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
BRCC3P46736 AL353093.1-201ENST00000441292 436 ntBASIC4.03□□□□□ -1.76
BRCC3P46736 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.03□□□□□ -1.76
BRCC3P46736 RPL6P5-201ENST00000445678 828 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms