Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 UBE2D3P4-201ENST00000441973 436 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC010733.1-201ENST00000451515 401 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 CEACAMP6-201ENST00000452007 574 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 SCARNA10-201ENST00000459255 330 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD12P35452 RPL21P103-201ENST00000479921 488 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 DYNLL1P6-201ENST00000503440 264 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 AC073358.1-201ENST00000505671 684 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC021146.8-201ENST00000507455 733 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC093840.1-201ENST00000511599 336 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 RNU6-488P-201ENST00000515918 99 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 RNU1-6P-201ENST00000516290 144 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 RN7SKP21-201ENST00000516503 220 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AP001317.1-201ENST00000531194 960 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXD12P35452 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD12P35452 AP001180.3-201ENST00000582221 145 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC022069.1-201ENST00000582910 658 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC017100.2-201ENST00000584628 355 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXD12P35452 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 RNF138P2-201ENST00000603490 592 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 MIR8069-1-201ENST00000616627 86 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXD12P35452 MIR8069-2-201ENST00000621412 86 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD12P35452 AC010300.1-201ENST00000600671 5134 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC139713.2-214ENST00000642059 1811 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXD12P35452 AC011978.2-201ENST00000569835 2054 ntBASIC4.81□□□□□ -1.64
HOXD12P35452 SGO1P1-201ENST00000603525 1447 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXD12P35452 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 AC008079.2-201ENST00000623543 20396 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 SGO1P2-201ENST00000429458 1589 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 U3.15-201ENST00000365398 212 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MIR16-1-201ENST00000385271 89 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 U3.30-201ENST00000391308 210 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 LAP3P1-201ENST00000403648 294 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 GSTA8P-201ENST00000404253 637 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 RNU6-757P-201ENST00000410334 100 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 RN7SKP182-201ENST00000410772 298 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC007738.1-201ENST00000413892 348 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MORF4L1P6-201ENST00000418771 268 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 RPS12P23-201ENST00000419579 400 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL592293.2-201ENST00000422292 996 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 AL593851.1-201ENST00000426171 157 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AC004975.1-201ENST00000428733 208 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL390023.1-201ENST00000428836 262 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 BTF3P6-201ENST00000448054 499 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXD12P35452 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 RPL21P134-201ENST00000453468 483 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MTND2P28-201ENST00000457540 1044 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 Y_RNA.719-201ENST00000517156 106 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 OR5M2P-201ENST00000529003 936 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXD12P35452 HIGD1AP17-201ENST00000554576 276 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 CENPUP2-201ENST00000555897 1186 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 MTCYBP33-201ENST00000575007 1130 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 BPTFP1-201ENST00000579209 492 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXD12P35452 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXD12P35452 AC022726.1-201ENST00000587475 207 ntBASIC4.8□□□□□ -1.64
HOXD12P35452 RPL12P25-202ENST00000598100 674 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms