Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.74□□□□□ -1.49
COL8A1P27658 AL627230.1-201ENST00000613077 211 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AL138726.1-201ENST00000614873 333 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 AL121949.2-201ENST00000403446 1548 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 HSPE1P11-201ENST00000339579 310 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 SNORD27-201ENST00000363981 72 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RNY1-201ENST00000364228 113 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RNU6-853P-201ENST00000364306 107 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RNU6-744P-201ENST00000365557 107 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RNU6-1316P-201ENST00000384242 108 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 MIR613-201ENST00000385248 95 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 AL391361.1-201ENST00000405580 489 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.73□□□□□ -1.49
COL8A1P27658 RPL23AP89-201ENST00000439324 255 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 ACA64.1-201ENST00000459171 127 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 AC022215.1-201ENST00000481770 362 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 HIGD1AP13-201ENST00000509878 289 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.73□□□□□ -1.49
COL8A1P27658 AC078899.1-201ENST00000521432 1185 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 AL133399.1-201ENST00000527476 298 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.73□□□□□ -1.49
COL8A1P27658 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.73□□□□□ -1.49
COL8A1P27658 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 HSPE1P3-201ENST00000559254 309 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RPL21P12-201ENST00000559810 515 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.73□□□□□ -1.49
COL8A1P27658 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 AL121992.2-201ENST00000606262 256 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 RN7SL787P-201ENST00000613000 284 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 ATP5A1P2-202ENST00000616464 443 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 AC078880.4-201ENST00000617627 1749 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
COL8A1P27658 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL8A1P27658 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL8A1P27658 AL136984.1-201ENST00000607611 1893 ntBASIC5.73□□□□□ -1.49
COL8A1P27658 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.72□□□□□ -1.49
COL8A1P27658 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.72□□□□□ -1.49
COL8A1P27658 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL8A1P27658 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL8A1P27658 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.72□□□□□ -1.49
COL8A1P27658 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.72□□□□□ -1.49
COL8A1P27658 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC5.72□□□□□ -1.49
COL8A1P27658 AC003973.3-201ENST00000624863 2822 ntBASIC5.72□□□□□ -1.49
COL8A1P27658 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC5.72□□□□□ -1.49
COL8A1P27658 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
COL8A1P27658 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL8A1P27658 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.72□□□□□ -1.49
COL8A1P27658 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL8A1P27658 USP9YP4-201ENST00000424401 1745 ntBASIC5.72□□□□□ -1.49
COL8A1P27658 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL8A1P27658 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL8A1P27658 Y_RNA.22-201ENST00000362492 102 ntBASIC5.72□□□□□ -1.49
COL8A1P27658 RNA5SP477-201ENST00000362639 119 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms