Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.36
VARSP26640 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
VARSP26640 AC123769.1-201ENST00000530992 3192 ntBASIC6.59□□□□□ -1.36
VARSP26640 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
VARSP26640 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
VARSP26640 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 AC002525.1-201ENST00000624392 1622 ntBASIC6.58□□□□□ -1.36
VARSP26640 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 RACGAP1P-201ENST00000550663 1879 ntBASIC6.58□□□□□ -1.36
VARSP26640 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 Y_RNA.60-201ENST00000362831 98 ntBASIC6.58□□□□□ -1.36
VARSP26640 RNU6-82P-201ENST00000363970 107 ntBASIC6.58□□□□□ -1.36
VARSP26640 Y_RNA.210-201ENST00000364161 110 ntBASIC6.58□□□□□ -1.36
VARSP26640 RNU1-115P-201ENST00000365329 160 ntBASIC6.58□□□□□ -1.36
VARSP26640 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VARSP26640 Y_RNA.473-201ENST00000384333 102 ntBASIC6.58□□□□□ -1.36
VARSP26640 RNU6-1207P-201ENST00000384343 107 ntBASIC6.58□□□□□ -1.36
VARSP26640 RNU6-921P-201ENST00000384361 107 ntBASIC6.58□□□□□ -1.36
VARSP26640 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VARSP26640 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 PGBD4P6-201ENST00000421501 610 ntBASIC6.58□□□□□ -1.36
VARSP26640 YWHAZP8-201ENST00000436935 731 ntBASIC6.58□□□□□ -1.36
VARSP26640 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.58□□□□□ -1.36
VARSP26640 RPL21P133-201ENST00000443666 476 ntBASIC6.58□□□□□ -1.36
VARSP26640 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.58□□□□□ -1.36
VARSP26640 UOX-201ENST00000471089 899 ntBASIC6.58□□□□□ -1.36
VARSP26640 Y_RNA.708-201ENST00000516950 96 ntBASIC6.58□□□□□ -1.36
VARSP26640 DEFB109D-201ENST00000529497 240 ntBASIC6.58□□□□□ -1.36
VARSP26640 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.58□□□□□ -1.36
VARSP26640 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.58□□□□□ -1.36
VARSP26640 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VARSP26640 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.58□□□□□ -1.36
VARSP26640 AC125232.2-201ENST00000592457 143 ntBASIC6.58□□□□□ -1.36
VARSP26640 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 AL512782.1-201ENST00000603093 364 ntBASIC6.58□□□□□ -1.36
VARSP26640 HSPE1P14-201ENST00000605812 302 ntBASIC6.58□□□□□ -1.36
VARSP26640 AC103710.2-201ENST00000609912 942 ntBASIC6.58□□□□□ -1.36
VARSP26640 DUSP12P1-201ENST00000612874 516 ntBASIC6.58□□□□□ -1.36
VARSP26640 EIF3FP1-201ENST00000613970 806 ntBASIC6.58□□□□□ -1.36
VARSP26640 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.58□□□□□ -1.36
VARSP26640 uc_338.9-201ENST00000617424 182 ntBASIC6.58□□□□□ -1.36
VARSP26640 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 AC027559.1-201ENST00000636288 271 ntBASIC6.58□□□□□ -1.36
VARSP26640 U6.114-201ENST00000636407 96 ntBASIC6.58□□□□□ -1.36
VARSP26640 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VARSP26640 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 AC010615.1-201ENST00000594254 1764 ntBASIC6.58□□□□□ -1.36
VARSP26640 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.58□□□□□ -1.36
VARSP26640 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.58□□□□□ -1.36
VARSP26640 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARSP26640 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VARSP26640 MTND5P7-201ENST00000413558 1798 ntBASIC6.57□□□□□ -1.36
VARSP26640 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VARSP26640 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.57□□□□□ -1.36
VARSP26640 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
VARSP26640 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VARSP26640 AL591848.4-201ENST00000567832 3472 ntBASIC6.57□□□□□ -1.36
VARSP26640 AL731566.1-201ENST00000620490 1937 ntBASIC6.57□□□□□ -1.36
VARSP26640 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VARSP26640 RNA5SP65-201ENST00000363166 119 ntBASIC6.57□□□□□ -1.36
VARSP26640 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VARSP26640 SNORA51.6-201ENST00000384151 125 ntBASIC6.57□□□□□ -1.36
VARSP26640 Y_RNA.461-201ENST00000384263 103 ntBASIC6.57□□□□□ -1.36
VARSP26640 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VARSP26640 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VARSP26640 AL133384.1-201ENST00000412744 351 ntBASIC6.57□□□□□ -1.36
VARSP26640 UBE2V1P14-201ENST00000415815 558 ntBASIC6.57□□□□□ -1.36
VARSP26640 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms