Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.85□□□□□ -1.47
NID1P14543 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.85□□□□□ -1.47
NID1P14543 AC073046.2-201ENST00000604756 527 ntBASIC5.85□□□□□ -1.47
NID1P14543 AC018889.1-201ENST00000605372 397 ntBASIC5.85□□□□□ -1.47
NID1P14543 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.85□□□□□ -1.47
NID1P14543 AL589743.6-201ENST00000611025 117 ntBASIC5.85□□□□□ -1.47
NID1P14543 AC098657.3-201ENST00000620434 263 ntBASIC5.85□□□□□ -1.47
NID1P14543 PLCE1P1-201ENST00000622094 305 ntBASIC5.85□□□□□ -1.47
NID1P14543 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.85□□□□□ -1.47
NID1P14543 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.85□□□□□ -1.47
NID1P14543 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 USP9YP4-201ENST00000424401 1745 ntBASIC5.85□□□□□ -1.47
NID1P14543 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.85□□□□□ -1.47
NID1P14543 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NID1P14543 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NID1P14543 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.85□□□□□ -1.47
NID1P14543 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NID1P14543 MTND5P28-201ENST00000438005 1594 ntBASIC5.84□□□□□ -1.47
NID1P14543 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NID1P14543 KPNA2P2-201ENST00000419546 1489 ntBASIC5.84□□□□□ -1.47
NID1P14543 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 DDX18P4-201ENST00000511690 1966 ntBASIC5.84□□□□□ -1.47
NID1P14543 GUCY1B2-204ENST00000531898 1979 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.84□□□□□ -1.47
NID1P14543 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NID1P14543 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NID1P14543 Y_RNA.117-201ENST00000363294 101 ntBASIC5.84□□□□□ -1.47
NID1P14543 MIR454-201ENST00000390180 115 ntBASIC5.84□□□□□ -1.47
NID1P14543 RNU6-903P-201ENST00000391270 109 ntBASIC5.84□□□□□ -1.47
NID1P14543 AL360271.1-201ENST00000395679 510 ntBASIC5.84□□□□□ -1.47
NID1P14543 Y_RNA.646-201ENST00000410980 101 ntBASIC5.84□□□□□ -1.47
NID1P14543 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 OR6C66P-201ENST00000414917 930 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC007562.1-201ENST00000421819 517 ntBASIC5.84□□□□□ -1.47
NID1P14543 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 AC073069.1-201ENST00000428657 441 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC079807.1-201ENST00000429993 481 ntBASIC5.84□□□□□ -1.47
NID1P14543 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.84□□□□□ -1.47
NID1P14543 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.84□□□□□ -1.47
NID1P14543 DNAJC19P5-201ENST00000443295 316 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC097359.1-201ENST00000447946 463 ntBASIC5.84□□□□□ -1.47
NID1P14543 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.84□□□□□ -1.47
NID1P14543 RN7SL221P-201ENST00000466190 281 ntBASIC5.84□□□□□ -1.47
NID1P14543 RPL7L1P8-201ENST00000469911 741 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC092451.1-201ENST00000480211 153 ntBASIC5.84□□□□□ -1.47
NID1P14543 RPL7P6-201ENST00000480903 738 ntBASIC5.84□□□□□ -1.47
NID1P14543 RPL23AP41-201ENST00000484754 458 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC058823.1-201ENST00000485315 474 ntBASIC5.84□□□□□ -1.47
NID1P14543 RPL22P13-201ENST00000493291 347 ntBASIC5.84□□□□□ -1.47
NID1P14543 HIGD1AP14-201ENST00000507617 282 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC097473.1-201ENST00000508142 408 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 AC008562.1-201ENST00000521763 330 ntBASIC5.84□□□□□ -1.47
NID1P14543 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 AP000857.1-201ENST00000532151 543 ntBASIC5.84□□□□□ -1.47
NID1P14543 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 OR4H6P-201ENST00000563771 921 ntBASIC5.84□□□□□ -1.47
NID1P14543 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.84□□□□□ -1.47
NID1P14543 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NID1P14543 BNIP3P25-201ENST00000596023 559 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC243312.2-201ENST00000623340 601 ntBASIC5.84□□□□□ -1.47
NID1P14543 AL669831.3-213ENST00000636676 183 ntBASIC5.84□□□□□ -1.47
NID1P14543 U6.101-201ENST00000637707 76 ntBASIC5.84□□□□□ -1.47
NID1P14543 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 MTND5P30-201ENST00000452896 1731 ntBASIC5.84□□□□□ -1.47
NID1P14543 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.84□□□□□ -1.47
NID1P14543 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NID1P14543 AC092692.1-201ENST00000623625 2595 ntBASIC5.84□□□□□ -1.47
NID1P14543 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
NID1P14543 SHQ1P1-201ENST00000437111 1544 ntBASIC5.84□□□□□ -1.48
NID1P14543 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NID1P14543 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
NID1P14543 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NID1P14543 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NID1P14543 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
NID1P14543 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NID1P14543 AL136984.1-201ENST00000607611 1893 ntBASIC5.83□□□□□ -1.48
NID1P14543 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NID1P14543 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NID1P14543 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NID1P14543 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.83□□□□□ -1.48
NID1P14543 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NID1P14543 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
NID1P14543 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NID1P14543 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.83□□□□□ -1.48
NID1P14543 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms