Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-956P-201ENST00000458868 103 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC090686.1-201ENST00000481577 749 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 RPS4XP20-201ENST00000505751 772 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC008802.1-201ENST00000519121 791 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC024940.3-201ENST00000538551 316 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 SULT1C2P2-201ENST00000562517 294 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 AL512347.1-201ENST00000566420 503 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC017100.2-201ENST00000584628 355 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC087783.2-201ENST00000605070 562 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AL021997.1-201ENST00000605757 193 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AL391497.1-201ENST00000608671 547 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC090527.3-201ENST00000619041 548 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 CR392039.4-201ENST00000624968 501 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 OR5BE1P-202ENST00000641168 1176 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS4BO75351 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC025125.1-201ENST00000624743 1922 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
VPS4BO75351 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.9□□□□□ -1.62
VPS4BO75351 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS4BO75351 INTS6P1-201ENST00000504674 2530 ntBASIC4.9□□□□□ -1.62
VPS4BO75351 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS4BO75351 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
VPS4BO75351 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS4BO75351 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.9□□□□□ -1.62
VPS4BO75351 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 SNORA62-201ENST00000365493 153 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VPS4BO75351 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VPS4BO75351 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VPS4BO75351 RNU2-16P-201ENST00000410712 136 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AL663109.1-201ENST00000411498 844 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 USP9YP33-201ENST00000412220 421 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 GSTM3P2-201ENST00000412746 530 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS4BO75351 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 USP9YP35-201ENST00000435696 412 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 MRPL48P1-201ENST00000445390 636 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC108463.1-201ENST00000450258 347 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 RPL36AP33-201ENST00000450395 310 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 MTND1P27-201ENST00000451117 902 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 ZNF114P1-201ENST00000453500 292 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS4BO75351 AC009127.1-201ENST00000467090 155 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 BX284632.1-201ENST00000478218 541 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC090013.1-201ENST00000485147 480 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC020890.1-201ENST00000491837 504 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 RNU6-720P-201ENST00000516363 108 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS4BO75351 MTND1P5-201ENST00000517906 940 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS4BO75351 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS4BO75351 MIR3611-201ENST00000584484 83 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC107982.3-201ENST00000584957 985 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 U73023.1-201ENST00000603134 700 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC128687.1-201ENST00000605304 619 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS4BO75351 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 AC015871.5-202ENST00000623252 701 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC116563.2-201ENST00000624751 535 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 AC092192.1-201ENST00000633154 1018 ntBASIC4.9□□□□□ -1.63
VPS4BO75351 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS4BO75351 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS4BO75351 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS4BO75351 AC009313.2-201ENST00000417893 1941 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms