Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 OLMALINC-203ENST00000641087 3779 ntBASIC6.07□□□□□ -1.44
SOX1O00570 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX1O00570 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX1O00570 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SOX1O00570 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 MTND5P3-201ENST00000438536 1800 ntBASIC6.06□□□□□ -1.44
SOX1O00570 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX1O00570 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX1O00570 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.06□□□□□ -1.44
SOX1O00570 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX1O00570 OR5J1P-201ENST00000313544 939 ntBASIC6.06□□□□□ -1.44
SOX1O00570 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX1O00570 RNU6-223P-201ENST00000362830 107 ntBASIC6.06□□□□□ -1.44
SOX1O00570 Y_RNA.216-201ENST00000364205 93 ntBASIC6.06□□□□□ -1.44
SOX1O00570 RNA5SP211-201ENST00000365516 117 ntBASIC6.06□□□□□ -1.44
SOX1O00570 RPS7P15-201ENST00000415804 584 ntBASIC6.06□□□□□ -1.44
SOX1O00570 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 RPS27AP17-201ENST00000463344 455 ntBASIC6.06□□□□□ -1.44
SOX1O00570 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 AP005597.4-201ENST00000526762 229 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 MIR4270-201ENST00000581799 70 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.06□□□□□ -1.44
SOX1O00570 AC069307.1-201ENST00000602820 447 ntBASIC6.06□□□□□ -1.44
SOX1O00570 RPL26P30-202ENST00000602923 645 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AL590392.1-201ENST00000604960 446 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC106900.2-201ENST00000604994 317 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC078899.5-201ENST00000612475 178 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC015712.7-201ENST00000615211 635 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC009248.2-201ENST00000619826 254 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AL161637.1-201ENST00000622380 412 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC021106.3-201ENST00000623925 531 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 AC010149.2-201ENST00000637608 315 ntBASIC6.06□□□□□ -1.44
SOX1O00570 AC090220.1-201ENST00000593078 1699 ntBASIC6.06□□□□□ -1.44
SOX1O00570 CASC19-284ENST00000642142 1868 ntBASIC6.06□□□□□ -1.44
SOX1O00570 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SOX1O00570 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX1O00570 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SOX1O00570 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.06□□□□□ -1.44
SOX1O00570 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX1O00570 AC006511.3-201ENST00000624929 1783 ntBASIC6.06□□□□□ -1.44
SOX1O00570 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.05□□□□□ -1.44
SOX1O00570 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX1O00570 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SOX1O00570 Y_RNA.46-201ENST00000362695 102 ntBASIC6.05□□□□□ -1.44
SOX1O00570 SNORA63C-201ENST00000364578 129 ntBASIC6.05□□□□□ -1.44
SOX1O00570 Y_RNA.315-201ENST00000365117 102 ntBASIC6.05□□□□□ -1.44
SOX1O00570 RNA5SP30-201ENST00000365552 115 ntBASIC6.05□□□□□ -1.44
SOX1O00570 Y_RNA.384-201ENST00000383909 102 ntBASIC6.05□□□□□ -1.44
SOX1O00570 Y_RNA.474-201ENST00000384341 102 ntBASIC6.05□□□□□ -1.44
SOX1O00570 SNORA75.4-201ENST00000391278 119 ntBASIC6.05□□□□□ -1.44
SOX1O00570 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX1O00570 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX1O00570 COX6B1P1-201ENST00000415962 213 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX1O00570 AC024082.2-201ENST00000434771 238 ntBASIC6.05□□□□□ -1.44
SOX1O00570 RPS3AP38-201ENST00000435889 763 ntBASIC6.05□□□□□ -1.44
SOX1O00570 OR6D1P-201ENST00000436165 939 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC006335.2-201ENST00000437993 330 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC016691.1-201ENST00000441321 413 ntBASIC6.05□□□□□ -1.44
SOX1O00570 NUTF2P7-201ENST00000453086 375 ntBASIC6.05□□□□□ -1.44
SOX1O00570 RPL7P15-201ENST00000461190 712 ntBASIC6.05□□□□□ -1.44
SOX1O00570 RN7SL570P-201ENST00000484405 292 ntBASIC6.05□□□□□ -1.44
SOX1O00570 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX1O00570 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX1O00570 RN7SKP13-201ENST00000515933 244 ntBASIC6.05□□□□□ -1.44
SOX1O00570 SNORD60.2-201ENST00000516883 86 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC022616.6-201ENST00000520479 119 ntBASIC6.05□□□□□ -1.44
SOX1O00570 OR5B19P-201ENST00000531766 928 ntBASIC6.05□□□□□ -1.44
SOX1O00570 AC023050.3-201ENST00000541142 333 ntBASIC6.05□□□□□ -1.44
SOX1O00570 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms