Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 AC091905.4-201ENST00000623432 202 ntBASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 Z95327.2-201ENST00000414579 1873 ntBASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 AC007529.1-201ENST00000418574 2178 ntBASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.59□□□□□ -1.35
TMEM88BA6NKF7 OLMALINC-203ENST00000641087 3779 ntBASIC6.59□□□□□ -1.36
TMEM88BA6NKF7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TMEM88BA6NKF7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC092692.1-201ENST00000623625 2595 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 RNU6-282P-201ENST00000365357 103 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AL133482.1-201ENST00000415988 498 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC016831.2-201ENST00000417179 352 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC114495.1-201ENST00000441274 436 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC093019.1-201ENST00000443135 252 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 RNU1-88P-201ENST00000459274 128 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC091951.2-201ENST00000500762 203 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC097173.1-201ENST00000505862 819 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC114786.4-201ENST00000508771 728 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 PARP1P2-201ENST00000556806 195 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC009101.1-201ENST00000568135 242 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC136624.4-201ENST00000573044 370 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AP003117.2-201ENST00000606010 545 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AL136221.1-201ENST00000621449 509 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC006210.2-201ENST00000367074 1545 ntBASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TMEM88BA6NKF7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 RPL32P3-201ENST00000359025 275 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 RNU5E-1-201ENST00000362477 120 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 RPL31P1-201ENST00000398116 372 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC078974.1-201ENST00000411597 223 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 RPL17P36-201ENST00000420302 549 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 RN7SL354P-201ENST00000469282 294 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC104383.1-201ENST00000530297 370 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC126615.2-201ENST00000553003 515 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC009117.1-201ENST00000563948 554 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AL356432.3-201ENST00000568952 465 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC011487.3-201ENST00000593607 453 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC068790.3-201ENST00000602988 553 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC112230.1-201ENST00000604342 547 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 BNIP3P10-201ENST00000605360 577 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC087045.1-201ENST00000605856 382 ntBASIC6.57□□□□□ -1.36
TMEM88BA6NKF7 AC128687.2-201ENST00000609657 566 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms