Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CLIC4Q9Y696 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.03■■□□□ 1.12
CLIC4Q9Y696 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLIC4Q9Y696 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLIC4Q9Y696 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.02■■□□□ 1.11
CLIC4Q9Y696 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLIC4Q9Y696 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.02■■□□□ 1.11
CLIC4Q9Y696 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 IRX1P1-201ENST00000438849 1838 ntBASIC22.01■■□□□ 1.11
CLIC4Q9Y696 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.01■■□□□ 1.11
CLIC4Q9Y696 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22■■□□□ 1.11
CLIC4Q9Y696 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CLIC4Q9Y696 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLIC4Q9Y696 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
CLIC4Q9Y696 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22■■□□□ 1.11
CLIC4Q9Y696 AP003097.1-201ENST00000530657 1135 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms