Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 AL031133.1-201ENST00000406807 723 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 TSPY5P-201ENST00000426936 936 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 COX11P1-201ENST00000489116 835 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 AC010653.2-201ENST00000623505 997 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 KRT8P8-201ENST00000434750 1448 ntBASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX11Q9Y5W9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 AC099778.1-201ENST00000568593 1911 ntBASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX11Q9Y5W9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 AC092338.2-201ENST00000568827 1415 ntBASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 AC092647.4-201ENST00000457211 535 ntBASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 AC141257.4-201ENST00000634557 245 ntBASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 AC136944.6-201ENST00000634818 245 ntBASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX11Q9Y5W9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 AL023803.3-201ENST00000615559 522 ntBASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SNX11Q9Y5W9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX11Q9Y5W9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms