Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 ARMC10P1-201ENST00000313754 855 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 AP001412.1-201ENST00000608405 714 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 CR392000.1-201ENST00000624770 1228 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 AC097493.4-201ENST00000641197 219 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 AL049637.2-201ENST00000641778 930 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 AC104417.2-201ENST00000562989 1793 ntBASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 FAM197Y1-201ENST00000421178 764 ntBASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AL160286.2-201ENST00000567150 934 ntBASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AC012306.2-201ENST00000609350 630 ntBASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AC113410.3-201ENST00000623366 203 ntBASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 Z82202.1-201ENST00000623446 1880 ntBASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI2Q9Y5P3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 KRT16P1-201ENST00000399124 1418 ntBASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 CD177P1-201ENST00000606252 935 ntBASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RAI2Q9Y5P3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAI2Q9Y5P3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 AC004980.1-204ENST00000429707 299 ntBASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.51■□□□□ 0.71
RAI2Q9Y5P3 AC131212.4-201ENST00000623606 975 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms