Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HRH3Q9Y5N1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HRH3Q9Y5N1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 AL355355.2-201ENST00000442321 338 ntBASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 AC010331.1-201ENST00000611423 582 ntBASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HRH3Q9Y5N1 AL158211.5-201ENST00000623583 2518 ntBASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.8■□□□□ 0.44
HRH3Q9Y5N1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 TREX1-205ENST00000625293 1783 ntBASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HRH3Q9Y5N1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms