Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 BX088651.1-201ENST00000540551 451 ntBASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 AC096733.2-201ENST00000609937 1394 ntBASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 TEX21P-204ENST00000641479 1693 ntBASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 KRT8P11-201ENST00000409686 1436 ntBASIC17.98■□□□□ 0.47
CLDN16Q9Y5I7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 UNC93B2-201ENST00000285383 730 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 TSPY23P-201ENST00000440136 739 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 FITM1-202ENST00000559294 800 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 AC116562.4-201ENST00000641316 2276 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 AL032819.2-201ENST00000624543 2162 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 KRT8P9-201ENST00000558927 1449 ntBASIC17.97■□□□□ 0.47
CLDN16Q9Y5I7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AL390955.1-201ENST00000428694 934 ntBASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 FAM207BP-201ENST00000447172 505 ntBASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN16Q9Y5I7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN16Q9Y5I7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms