Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 AC005332.8-201ENST00000622750 2735 ntBASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 AL049812.1-201ENST00000432563 2267 ntBASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF11Q9Y3C5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 ZNF815P-204ENST00000434898 1737 ntBASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RNF11Q9Y3C5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 YBX1P10-201ENST00000444752 975 ntBASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 UNC93B4-201ENST00000505679 747 ntBASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 AL121829.2-201ENST00000620908 328 ntBASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF11Q9Y3C5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 AC120498.9-201ENST00000339021 3867 ntBASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RNF11Q9Y3C5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms