Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 AL353807.1-201ENST00000427475 662 ntBASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 AP001412.1-201ENST00000608405 714 ntBASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 AL049637.2-201ENST00000641778 930 ntBASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPH3AQ9Y2J0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 FAM197Y1-201ENST00000421178 764 ntBASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 TSPY7P-201ENST00000431358 1114 ntBASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 C1QL1P1-201ENST00000568105 661 ntBASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 AC113410.3-201ENST00000623366 203 ntBASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPH3AQ9Y2J0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 KRT8P8-201ENST00000434750 1448 ntBASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 CR392000.1-201ENST00000624770 1228 ntBASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPH3AQ9Y2J0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 AC125437.2-201ENST00000625180 2167 ntBASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.66■□□□□ 0.42
RPH3AQ9Y2J0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms