Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHMP2BQ9UQN3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
CHMP2BQ9UQN3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 AC083906.2-201ENST00000511578 360 ntBASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 AC091874.3-201ENST00000512672 1195 ntBASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 AL121832.2-201ENST00000610979 668 ntBASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP2BQ9UQN3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 AC104417.2-201ENST00000562989 1793 ntBASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 AC006970.2-201ENST00000450065 779 ntBASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 AC092118.2-201ENST00000613495 667 ntBASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP2BQ9UQN3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms