Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 AL031985.4-201ENST00000642138 673 ntBASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 KRT8P41-201ENST00000533985 1514 ntBASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 AC026271.3-201ENST00000571884 352 ntBASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHA4Q9UN74 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PCDHA4Q9UN74 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHA4Q9UN74 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 TEX21P-204ENST00000641479 1693 ntBASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA4Q9UN74 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 AC066615.1-201ENST00000640911 628 ntBASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
PCDHA4Q9UN74 RCC2P6-201ENST00000526625 1557 ntBASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA4Q9UN74 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 NUDT16P1-203ENST00000513809 620 ntBASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms