Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 WIZP1-201ENST00000531444 2299 ntBASIC17.62■□□□□ 0.41
CLN6Q9NWW5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 AC016405.3-201ENST00000607710 860 ntBASIC17.62■□□□□ 0.41
CLN6Q9NWW5 AC013268.1-206ENST00000638368 961 ntBASIC17.62■□□□□ 0.41
CLN6Q9NWW5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 AC112229.1-201ENST00000639295 961 ntBASIC17.62■□□□□ 0.41
CLN6Q9NWW5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN6Q9NWW5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 AC005332.8-201ENST00000622750 2735 ntBASIC17.61■□□□□ 0.41
CLN6Q9NWW5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 Z98044.1-201ENST00000632503 1764 ntBASIC17.61■□□□□ 0.41
CLN6Q9NWW5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN6Q9NWW5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 AC100791.3-201ENST00000617619 330 ntBASIC17.6■□□□□ 0.41
CLN6Q9NWW5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 AL031598.1-201ENST00000561511 1773 ntBASIC17.6■□□□□ 0.41
CLN6Q9NWW5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 AC018470.1-201ENST00000624790 3129 ntBASIC17.6■□□□□ 0.41
CLN6Q9NWW5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN6Q9NWW5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN6Q9NWW5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms