Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 AP001412.1-201ENST00000608405 714 ntBASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 AL031985.4-201ENST00000642138 673 ntBASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 TEX21P-204ENST00000641479 1693 ntBASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ECHDC1Q9NTX5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 MIR718-201ENST00000390190 70 ntBASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 AC026271.3-201ENST00000571884 352 ntBASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.53■■□□□ 1.36
ECHDC1Q9NTX5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ECHDC1Q9NTX5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
ECHDC1Q9NTX5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 AC141586.3-201ENST00000562166 1838 ntBASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 RCC2P6-201ENST00000526625 1557 ntBASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 AC066615.1-201ENST00000640911 628 ntBASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.5■■□□□ 1.35
ECHDC1Q9NTX5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms