Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 AL133373.2-201ENST00000623187 2828 ntBASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB16Q9NRJ7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 HTR7P1-202ENST00000624664 4411 ntBASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 AL390719.1-204ENST00000412397 1219 ntBASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB16Q9NRJ7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 AC080038.1-201ENST00000611274 1154 ntBASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 AC092666.2-201ENST00000613287 246 ntBASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 AL049812.1-201ENST00000432563 2267 ntBASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHB16Q9NRJ7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHB16Q9NRJ7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms