Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 NPAP1P7-201ENST00000613027 823 ntBASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RTFDC1Q9BY42 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTFDC1Q9BY42 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AC012313.10-201ENST00000623509 926 ntBASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AC009237.14-201ENST00000609975 1594 ntBASIC23.48■■□□□ 1.35
RTFDC1Q9BY42 AL162377.1-201ENST00000618844 1793 ntBASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 AL691432.3-201ENST00000621860 400 ntBASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.47■■□□□ 1.35
RTFDC1Q9BY42 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTFDC1Q9BY42 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RTFDC1Q9BY42 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.35
RTFDC1Q9BY42 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
RTFDC1Q9BY42 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
RTFDC1Q9BY42 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 HBZP1-201ENST00000354915 429 ntBASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTFDC1Q9BY42 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 CR769767.2-201ENST00000622735 460 ntBASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTFDC1Q9BY42 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms