Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 Z82202.1-201ENST00000623446 1880 ntBASIC19■□□□□ 0.63
CCM2Q9BSQ5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 AIRN-201ENST00000601203 4374 ntBASIC19■□□□□ 0.63
CCM2Q9BSQ5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCM2Q9BSQ5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19■□□□□ 0.63
CCM2Q9BSQ5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AC004980.1-204ENST00000429707 299 ntBASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 MIR4497-201ENST00000583208 89 ntBASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AL031985.4-201ENST00000642138 673 ntBASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 KRT17P2-201ENST00000300992 1314 ntBASIC18.99■□□□□ 0.63
CCM2Q9BSQ5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCM2Q9BSQ5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 SNORA78-201ENST00000459373 127 ntBASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.97■□□□□ 0.63
CCM2Q9BSQ5 MIR4785-201ENST00000585005 73 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms