Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC6Q99741 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.66■□□□□ 0.58
CDC6Q99741 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.66■□□□□ 0.58
CDC6Q99741 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CDC6Q99741 AC083849.1-201ENST00000615227 514 ntBASIC18.66■□□□□ 0.58
CDC6Q99741 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.66■□□□□ 0.58
CDC6Q99741 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDC6Q99741 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDC6Q99741 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC6Q99741 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC6Q99741 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDC6Q99741 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CDC6Q99741 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.65■□□□□ 0.58
CDC6Q99741 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.65■□□□□ 0.58
CDC6Q99741 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC6Q99741 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDC6Q99741 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CDC6Q99741 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDC6Q99741 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.64■□□□□ 0.58
CDC6Q99741 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDC6Q99741 AP001271.2-201ENST00000624018 1556 ntBASIC18.64■□□□□ 0.58
CDC6Q99741 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC6Q99741 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDC6Q99741 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.64■□□□□ 0.57
CDC6Q99741 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CDC6Q99741 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 GCSHP2-201ENST00000560971 527 ntBASIC18.63■□□□□ 0.57
CDC6Q99741 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC6Q99741 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.63■□□□□ 0.57
CDC6Q99741 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC6Q99741 HYMAI.1-201ENST00000620949 238 ntBASIC18.63■□□□□ 0.57
CDC6Q99741 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 KRT8P41-201ENST00000533985 1514 ntBASIC18.63■□□□□ 0.57
CDC6Q99741 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
CDC6Q99741 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC6Q99741 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDC6Q99741 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.63■□□□□ 0.57
CDC6Q99741 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDC6Q99741 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CDC6Q99741 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC6Q99741 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms