Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA3Q99618 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA3Q99618 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDCA3Q99618 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA3Q99618 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 KRT17P6-201ENST00000453795 1220 ntBASIC20.11■□□□□ 0.81
CDCA3Q99618 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.11■□□□□ 0.81
CDCA3Q99618 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA3Q99618 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.11■□□□□ 0.81
CDCA3Q99618 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA3Q99618 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDCA3Q99618 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA3Q99618 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDCA3Q99618 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.1■□□□□ 0.81
CDCA3Q99618 AC092597.1-201ENST00000487352 616 ntBASIC20.1■□□□□ 0.81
CDCA3Q99618 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDCA3Q99618 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA3Q99618 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.1■□□□□ 0.81
CDCA3Q99618 AC016734.2-201ENST00000624325 1377 ntBASIC20.09■□□□□ 0.81
CDCA3Q99618 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CDCA3Q99618 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 NUS1P1-201ENST00000446295 882 ntBASIC20.09■□□□□ 0.81
CDCA3Q99618 MIR3180-1-201ENST00000580374 94 ntBASIC20.09■□□□□ 0.81
CDCA3Q99618 MIR3180-3-201ENST00000584616 94 ntBASIC20.09■□□□□ 0.81
CDCA3Q99618 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.09■□□□□ 0.81
CDCA3Q99618 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.09■□□□□ 0.81
CDCA3Q99618 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDCA3Q99618 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.09■□□□□ 0.81
CDCA3Q99618 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.09■□□□□ 0.81
CDCA3Q99618 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDCA3Q99618 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDCA3Q99618 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
CDCA3Q99618 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDCA3Q99618 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.08■□□□□ 0.81
CDCA3Q99618 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDCA3Q99618 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA3Q99618 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA3Q99618 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA3Q99618 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA3Q99618 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA3Q99618 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.08■□□□□ 0.81
CDCA3Q99618 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.08■□□□□ 0.81
CDCA3Q99618 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDCA3Q99618 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA3Q99618 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDCA3Q99618 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.08■□□□□ 0.8
CDCA3Q99618 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.08■□□□□ 0.8
CDCA3Q99618 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA3Q99618 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDCA3Q99618 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 AL845331.1-201ENST00000424978 1190 ntBASIC20.07■□□□□ 0.8
CDCA3Q99618 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA3Q99618 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA3Q99618 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms