Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 AIRN-201ENST00000601203 4374 ntBASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP1Q96SZ6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 LINC01568-207ENST00000641790 1380 ntBASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP1Q96SZ6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 KRT18P22-201ENST00000402024 1347 ntBASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TSPY14P-201ENST00000303979 915 ntBASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 AC128688.1-201ENST00000487626 519 ntBASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 EGLN1P1-201ENST00000531623 762 ntBASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP1Q96SZ6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 KRT8P9-201ENST00000558927 1449 ntBASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 SLC25A1P2-201ENST00000430693 912 ntBASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 TSPY21P-201ENST00000433481 731 ntBASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 CKBP1-201ENST00000565489 1086 ntBASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 AC010947.1-201ENST00000623454 693 ntBASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP1Q96SZ6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDK5RAP1Q96SZ6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDK5RAP1Q96SZ6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDK5RAP1Q96SZ6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 TREX1-205ENST00000625293 1783 ntBASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP1Q96SZ6 CYP2D8P-201ENST00000433633 1490 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms