Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 AL157384.1-201ENST00000445995 2473 ntBASIC18.86■□□□□ 0.61
PCDH15Q96QU1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH15Q96QU1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 AL645929.1-201ENST00000420084 975 ntBASIC18.84■□□□□ 0.61
PCDH15Q96QU1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.84■□□□□ 0.61
PCDH15Q96QU1 AL691432.3-201ENST00000621860 400 ntBASIC18.84■□□□□ 0.61
PCDH15Q96QU1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH15Q96QU1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH15Q96QU1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH15Q96QU1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.83■□□□□ 0.61
PCDH15Q96QU1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH15Q96QU1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH15Q96QU1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH15Q96QU1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 KRT8P10-201ENST00000450021 1447 ntBASIC18.82■□□□□ 0.6
PCDH15Q96QU1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH15Q96QU1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 MIR3180-1-201ENST00000580374 94 ntBASIC18.81■□□□□ 0.6
PCDH15Q96QU1 MIR3180-3-201ENST00000584616 94 ntBASIC18.81■□□□□ 0.6
PCDH15Q96QU1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 RN7SL510P-201ENST00000581311 263 ntBASIC18.81■□□□□ 0.6
PCDH15Q96QU1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH15Q96QU1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms