Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 MIR4651-201ENST00000582622 73 ntBASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
MS4A4EQ96PG1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 POU5F1P3-201ENST00000428824 1078 ntBASIC18■□□□□ 0.47
MS4A4EQ96PG1 KRT16P5-201ENST00000455284 522 ntBASIC18■□□□□ 0.47
MS4A4EQ96PG1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 AC124016.1-201ENST00000609552 612 ntBASIC18■□□□□ 0.47
MS4A4EQ96PG1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
MS4A4EQ96PG1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MS4A4EQ96PG1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 AC133681.1-201ENST00000465482 601 ntBASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 RN7SL471P-201ENST00000580476 299 ntBASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 AP000974.1-201ENST00000623909 2387 ntBASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MS4A4EQ96PG1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 AC128676.1-201ENST00000454392 318 ntBASIC17.98■□□□□ 0.47
MS4A4EQ96PG1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms