Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf72Q96LT7 TEX21P-204ENST00000641479 1693 ntBASIC19.84■□□□□ 0.77
C9orf72Q96LT7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 AC104581.1-202ENST00000635932 2618 ntBASIC19.84■□□□□ 0.77
C9orf72Q96LT7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C9orf72Q96LT7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 AC006333.2-201ENST00000607957 2099 ntBASIC19.83■□□□□ 0.77
C9orf72Q96LT7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.83■□□□□ 0.77
C9orf72Q96LT7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.83■□□□□ 0.76
C9orf72Q96LT7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 AC116351.2-201ENST00000606540 1585 ntBASIC19.82■□□□□ 0.76
C9orf72Q96LT7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms