Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 FAM210CP-201ENST00000445714 574 ntBASIC19.67■□□□□ 0.74
CCDC97Q96F63 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 LINC01023-201ENST00000606054 436 ntBASIC19.67■□□□□ 0.74
CCDC97Q96F63 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC97Q96F63 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC97Q96F63 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC97Q96F63 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 MIR1224-201ENST00000408193 85 ntBASIC19.66■□□□□ 0.74
CCDC97Q96F63 AL390719.1-204ENST00000412397 1219 ntBASIC19.66■□□□□ 0.74
CCDC97Q96F63 ECEL1P3-201ENST00000427961 737 ntBASIC19.66■□□□□ 0.74
CCDC97Q96F63 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC97Q96F63 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC97Q96F63 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC97Q96F63 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.65■□□□□ 0.74
CCDC97Q96F63 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 KRT16P6-202ENST00000425692 1426 ntBASIC19.65■□□□□ 0.74
CCDC97Q96F63 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC97Q96F63 OR6D1P-202ENST00000641007 5290 ntBASIC19.65■□□□□ 0.74
CCDC97Q96F63 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC97Q96F63 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC97Q96F63 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC97Q96F63 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC97Q96F63 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC97Q96F63 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC97Q96F63 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 AC120498.8-201ENST00000614275 531 ntBASIC19.64■□□□□ 0.73
CCDC97Q96F63 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
CCDC97Q96F63 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC97Q96F63 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC97Q96F63 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC97Q96F63 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms