Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 FEM1AP1-201ENST00000431297 1995 ntBASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21■□□□□ 0.95
TRIM43Q96BQ3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM43Q96BQ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM43Q96BQ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 KRT8P26-201ENST00000534154 1276 ntBASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM43Q96BQ3 AP001271.2-201ENST00000624018 1556 ntBASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AC024243.1-201ENST00000609234 778 ntBASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 KRT18P1-202ENST00000452408 1331 ntBASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AL162741.1-201ENST00000565563 1558 ntBASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM43Q96BQ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM43Q96BQ3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms