Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2Q8WWK9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 AC004854.2-201ENST00000608450 1441 ntBASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 MFSD11-216ENST00000590393 1141 ntBASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2Q8WWK9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 MCRIP2P1-201ENST00000394346 511 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 YBX1P1-201ENST00000445822 960 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 SUDS3P1-201ENST00000505831 966 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 AC023632.3-201ENST00000521633 145 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 AL162412.1-201ENST00000567129 965 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 AC105020.6-201ENST00000621523 1217 ntBASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CKAP2Q8WWK9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 UBE2DNL-204ENST00000602536 740 ntBASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 ANO7L1-203ENST00000602586 1720 ntBASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CKAP2Q8WWK9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 MKRN4P-201ENST00000444706 1521 ntBASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 TERF1P5-201ENST00000477545 1207 ntBASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 AC100791.3-201ENST00000617619 330 ntBASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKAP2Q8WWK9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 MYCNOS-205ENST00000641950 531 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms