Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 AL355355.2-201ENST00000442321 338 ntBASIC23.88■■□□□ 1.41
SSH3Q8TE77 AC011298.2-201ENST00000617989 482 ntBASIC23.88■■□□□ 1.41
SSH3Q8TE77 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SSH3Q8TE77 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.88■■□□□ 1.41
SSH3Q8TE77 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SSH3Q8TE77 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SSH3Q8TE77 AC141586.3-201ENST00000562166 1838 ntBASIC23.87■■□□□ 1.41
SSH3Q8TE77 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 TSPY23P-201ENST00000440136 739 ntBASIC23.86■■□□□ 1.41
SSH3Q8TE77 TSPY15P-201ENST00000457163 923 ntBASIC23.86■■□□□ 1.41
SSH3Q8TE77 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 AL355075.4-201ENST00000554988 638 ntBASIC23.86■■□□□ 1.41
SSH3Q8TE77 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 AP000692.2-201ENST00000608391 879 ntBASIC23.86■■□□□ 1.41
SSH3Q8TE77 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SSH3Q8TE77 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SSH3Q8TE77 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.85■■□□□ 1.41
SSH3Q8TE77 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSH3Q8TE77 KRT17P2-201ENST00000300992 1314 ntBASIC23.84■■□□□ 1.41
SSH3Q8TE77 KRT8P11-201ENST00000409686 1436 ntBASIC23.84■■□□□ 1.41
SSH3Q8TE77 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSH3Q8TE77 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.84■■□□□ 1.41
SSH3Q8TE77 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSH3Q8TE77 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms